Lemur catta (Ring-tailed lemur) genome, mLemCat1
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https://www.ncbi.nlm.nih.gov/bioproject/PRJNA562215
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The ring-tailed lemur (Lemur cata) is primate that like other lemurs is endemic to Madagascar. This assembly has been produced as part of the G10K-VGP project. Sequencing was conducted with Pacific long reads, Bionano optical maps, and 10X Genomics libraries at the Rockefeller University Vertebrate Genomes Lab led by Olivier Fedrigo, HiC at Arima Genomics, and Illumina sequencing. Genome assembly was conducted by the Bettina Haase and Marcela Uliano-Silva, and supervised by Arang Rhie, using the VGP 1.6 pipeline. The primary haplotype was assembled to chromosomes, whereas the alternate as contigs only. Coordination and funding was done by Tomas Marques-Bonet. The raw data and assembly are currently under a G10K-VGP publication embargo until removed from this description, following the G10K data use policy at the following URL: https://genome10k.soe.ucsc.edu/data-use-policies/
环尾狐猴(Lemur cata)是一种灵长类动物,与其他狐猴类群一样为马达加斯加特有物种。本基因组组装系G10K-VGP项目的研究成果之一。测序工作由奥利维耶·费德里戈(Olivier Fedrigo)领衔的洛克菲勒大学脊椎动物基因组实验室完成,采用太平洋长读长测序(Pacific long reads)、Bionano光学图谱(Bionano optical maps)及10X Genomics文库技术,同时由Arima Genomics提供Hi-C测序服务,并开展了Illumina测序。基因组组装工作由贝蒂娜·哈泽(Bettina Haase)与玛塞拉·乌利亚诺-席尔瓦(Marcela Uliano-Silva)完成,由阿兰·里耶(Arang Rhie)监督,采用VGP 1.6组装流程。其中主单倍型基因组已组装至染色体水平,而备用单倍型基因组仅组装为重叠群(contigs)。项目协调与资金支持由托马斯·马克斯-博内特(Tomas Marques-Bonet)负责。根据G10K数据使用政策(详见链接:https://genome10k.soe.ucsc.edu/data-use-policies/),原始数据与基因组组装目前处于G10K-VGP出版禁令期内,直至本描述移除相关内容。
创建时间:
2019-08-26



