Additional file 7: of Transcriptional profiling of liver during the critical embryo-to-hatchling transition period in the chicken (Gallus gallus)

Name: Additional file 7: of Transcriptional profiling of liver during the critical embryo-to-hatchling transition period in the chicken (Gallus gallus)
Creator: Carré, Wilfrid; Trakooljul, Nares; Wu, Cathy; Huang, Hongzhan; Cogburn, Larry; White, Harold; Wang, Xiaofei; Chen, Chuming
Published: 2024-02-16 00:00:00
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Figshare2024-02-16 更新2026-04-08 收录

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https://springernature.figshare.com/articles/dataset/Additional_file_7_of_Transcriptional_profiling_of_liver_during_the_critical_embryo-to-hatchling_transition_period_in_the_chicken_Gallus_gallus_/7120379/1

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Canonical and biological pathways found by IPA in the D1 vs. D9 hatchling contrast. The AR-DEGs identified in the D1 vs. D9 contrast were assigned by IPA to overrepresented canonical and functional and pathways. IPA uses Fisher’s Exact Test to determine probability (P ≤ 0.05) of each AR-DEG belonging to a particular canonical pathway or biological function. Each worksheet provides a list of AR-DEGs assigned to particular canonical pathways or biological functions, annotated with gene symbol, Entrez name, log2 ratio, cellular compartment, type and Entrez protein ID. (XLSX 31 kb)

本数据集收录了通过Ingenuity通路分析（Ingenuity Pathway Analysis, IPA）在D1与D9孵化幼体组间对比中鉴定得到的经典通路与生物学通路。在D1与D9组间对比中鉴定得到的雄激素受体相关差异表达基因（Androgen Receptor-associated Differentially Expressed Genes, AR-DEGs）经IPA注释，被分配至富集的经典通路与功能通路。 IPA采用费希尔精确检验（Fisher’s Exact Test）计算每个AR-DEG属于某一特定经典通路或生物学功能的概率，显著性阈值设置为P≤0.05。每个工作表均列出了分配至特定经典通路或生物学功能的AR-DEGs，并附带基因符号、Entrez基因名、log2比值、细胞定位、基因类型以及Entrez蛋白ID的注释信息。（XLSX格式，文件大小31 KB）

提供机构：

Carré, Wilfrid; Trakooljul, Nares; Wu, Cathy; Huang, Hongzhan; Cogburn, Larry; White, Harold; Wang, Xiaofei; Chen, Chuming

创建时间：

2018-09-22