Fractal OME-Zarr Test data for napari-ome-zarr-navigator
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Test OME-Zarr data for https://github.com/fractal-analytics-platform/napari-ome-zarr-navigator Contains a 2 HCS OME-Zarrs (2D & 3D) with 2 wells (B03, B05), each with 2 FOVs and the following AnnData tables for each well: Condition table (per image) Feature measurement table 2 ROI tables Additionally, the following tables were added: 4. A plate condition table (csv) 5. CSV versions of the ROI tables 6. A masking ROI table for nuclei (CSV backend) 7. A csv feature table
本数据集为适配 https://github.com/fractal-analytics-platform/napari-ome-zarr-navigator 的测试用OME-Zarr数据。 包含2组高内涵筛选(HCS, High Content Screening)OME-Zarr数据,分别为2D与3D格式,涵盖2个孔位(B03、B05),每个孔位包含2个视野(FOV, Field of View),且为每个孔位配备以下AnnData表格: 1. 单图像条件表(Condition table, per image) 2. 特征测量表(Feature measurement table) 3. 2张感兴趣区域(ROI, Region of Interest)表 此外,额外新增以下表格: 4. 板级条件表(CSV格式) 5. ROI表的CSV版本 6. 细胞核掩膜ROI表(采用CSV作为存储后端) 7. CSV格式特征表



