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Pond water SIP fraction microbial communities from Walnut Creek, CA, United States - JGIPond_B_20pct_30ng_1_1.7232 metagenome

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NIAID Data Ecosystem2026-03-14 收录
下载链接:
https://www.ncbi.nlm.nih.gov/sra/SRP398996
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资源简介:
SIP metagenome fraction of pond sample from Joint Genome Institute, Walnut Creek spiked with Pseudomonas putida & Escherichia coli bacterial isolates (for each isolate 30ng of DNA labeled at 20pct with C13 were added); replicate number 1. This fraction has a SIP fraction number 10 and DNA density of 1.7232 g/uL. This is part of a larger study to identify the limit of detection of JGI SIP metagenomics pipeline.

来自联合基因组研究所(Joint Genome Institute, JGI)沃尔纳特溪池塘样本的稳定性同位素探针(Stable Isotope Probing, SIP)宏基因组组分,实验中向该组分中掺入了恶臭假单胞菌(Pseudomonas putida)与大肠杆菌(Escherichia coli)的细菌分离株——针对每株分离株,均添加30ng以20%比例被碳13(C13)标记的DNA;该样本为第1次生物学重复。该组分的SIP组分编号为10,DNA密度为1.7232 g/μL。本数据集属于一项旨在确定JGI SIP宏基因组分析流程检测限的大型研究的一部分。
创建时间:
2022-09-26
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