Diversity, adaptation and metabolic potential of the microbiome in biofilms from a high-temperature hot spring

``` # Diversity, adaptation and metabolic potential of the microbiome in biofilms from a high-temperature hot spring https://doi:10.5061/dryad.sn02v6xcd Raw reads for amplicon and shotgun sequencing data are publicly available in NCBI with BioProject number PRJNA1082868 and BioSample accessions SAMN40219291 and SAMN40219292. The contigs for medium- and high-quality metagenome-assembled genomes (MAGs) are available in this open-access repository Dryad platform. This dataset are the MAGs fasta files of a biofilm found in a hot spring. ## Description of the data and file structure The MAGs information can be used as part of microbiology and bioinformatic analyses. This may include genome-to-genome comparison between individual MAG with closely related MAG or cultured microbial genomes. The fasta files can be used for phylogenetic tree construction. Besides, the files have ample of genes sequences suitable for gene mining.There is no missing data codes. The files are named from bin.1.XXX.fa to bin.61.XXX.fa, in which XXX could be orig, strict, or permissive, a short-note (designation) generated by metaWRAP that describe the approach for binning process. Please refer to metaWRAP (https://github.com/bxlab/metaWRAP) to understand the differences. The phyla or the affiliation for each MAGs is not provided in this dataset. Users who are interested may read the related published article. ## Sharing/Access information Raw reads for amplicon and shotgun sequencing data are publicly available in NCBI with BioProject number PRJNA1082868 and BioSample accessions SAMN40219291 and SAMN40219292. Links to other publicly accessible locations of the data: https://www.ncbi.nlm.nih.gov/bioproject/?term=PRJNA1082868 ## Code/Software No special code was used for this work.Standard procedure was made accordance to the steps provided in this link: https://github.com/bxlab/metaWRAP ```

# 高温温泉生物膜微生物组的多样性、适应性与代谢潜能 https://doi.org/10.5061/dryad.sn02v6xcd
扩增子测序与鸟枪测序的原始读段已在NCBI公开，其生物项目编号为PRJNA1082868，生物样本登录号为SAMN40219291与SAMN40219292。中高质量宏基因组组装基因组（metagenome-assembled genomes, MAGs）的重叠群可在开放获取平台Dryad获取。本数据集为某温泉生物膜的MAGs FASTA格式文件。
## 数据与文件结构说明
本数据集的MAGs信息可用于微生物学与生物信息学分析，包括单MAG与近缘MAG或已培养微生物基因组的全基因组比对。FASTA格式文件可用于系统发育树构建，此外文件中包含大量适用于基因挖掘的基因序列。本数据集无缺失数据编码。
文件命名格式为bin.1.XXX.fa至bin.61.XXX.fa，其中XXX可取值为orig、strict或permissive，这些是由metaWRAP生成的短注释（标识），用于描述基因组分箱流程所采用的方法。具体差异可参考metaWRAP工具（https://github.com/bxlab/metaWRAP）。本数据集未提供每个MAG的门类归属或分类学关联信息，有相关需求的用户可查阅已发表的相关论文。
## 共享与获取信息
扩增子测序与鸟枪测序的原始读段已在NCBI公开，其生物项目编号为PRJNA1082868，生物样本登录号为SAMN40219291与SAMN40219292。该数据的其他公开访问链接：https://www.ncbi.nlm.nih.gov/bioproject/?term=PRJNA1082868
## 代码与软件说明
本研究未使用特殊代码，分析流程严格遵循metaWRAP工具（https://github.com/bxlab/metaWRAP）提供的标准步骤。