Additional file 2 of Advances in understanding the genetic architecture of antibody response to paratuberculosis in sheep by heritability estimate and LDLA mapping analyses and investigation of candidate regions using sequence-based data

Additional file 2: Table S1. LDLA mapping results for all the 43,390 50 K SNP positions tested for CAR. The table reports the results of the genome scan carried out on the 43,390 positions of the 50 K by LDLA mapping, significances are reported as − log10 of both nominal P-values of F-tests and false discovery rate. OAR: Ovis aries chromosomes; SNP name and position (bp) name and position in base pair of the 50 K SNP (from the Ovine Genome Assembly v4.0); − log10(P-value): negative logarithm of the P-value corresponding to F-test; -log10(FDR): negative logarithm of the false discovery rate. Table S2. LDLA mapping results for all the 43,390 50 K SNP positions tested for SP. The table reports the results of the genome scan carried out on the 43,390 positions of the 50 K by LDLA mapping, significances are reported as -log10 of both nominal P-values of F-tests and false discovery rate. OAR: Ovis aries chromosomes; SNP name and position (bp) name and position in base pair of the 50 K SNP (from the Ovine Genome Assembly v4.0); − log10(P-value): negative logarithm of the P-value corresponding to F-test; − log10(FDR): negative logarithm of the false discovery rate

附加文件2：表S1。针对CAR的全部43,390个50K单核苷酸多态性（Single Nucleotide Polymorphism, SNP）位点的连锁不平衡关联定位（LDLA）结果。该表格呈现了基于50K SNP芯片的43,390个SNP位点通过LDLA定位开展全基因组扫描的结果，显著性以F检验名义P值与错误发现率（False Discovery Rate, FDR）的负对数形式展示。OAR：绵羊（Ovis aries）染色体；SNP名称及碱基对位置（bp）：50K SNP的名称与碱基对位置（源自绵羊基因组组装版本v4.0）；−log10(P值)：F检验对应P值的负对数；−log10(FDR)：错误发现率的负对数。表S2：针对SP的全部43,390个50K SNP位点的LDLA定位结果。该表格呈现了基于50K SNP芯片的43,390个SNP位点通过LDLA定位开展全基因组扫描的结果，显著性以F检验名义P值与错误发现率的负对数形式展示。OAR：绵羊（Ovis aries）染色体；SNP名称及碱基对位置（bp）：50K SNP的名称与碱基对位置（源自绵羊基因组组装版本v4.0）；−log10(P值)：F检验对应P值的负对数；−log10(FDR)：错误发现率的负对数。