Additional file 1: Table S2. of RNAseq analysis of Aspergillus fumigatus in blood reveals a just wait and see resting stage behavior

Sheet A: List of differential expressed genes in blood after 30 min and after 180 min in stringent (B30s/B180s) and less stringent (B30ls/B180ls) conditions. Sheet B and C: Genes included and excluded from the B30 (B) and B180 (C) lists were obtained by following method. Stringent (s) stands for no or opposite differential expression in the corresponding minimal medium condition. The list of genes with differential expression under less stringent conditions (ls) was obtained by adding those genes to the stringent condition lists that were differentially expressed to lower or higher extend than the blood values. A gene was included when the difference of the M value was more than 0.8 for positive values or less than −0.8 for negative values in the comparison M30/M180-pre to B30/B180-pre. M represents the log2-ratio or fold change for positive (up-regulated) and negative (down-regulated) genes. D is the absolute value of the difference. Prob. is the probability of differential expression obtained by NOISeq method. (XLS 1261 kb)

工作表A：血液样本在孵育30分钟及180分钟后，于严格（B30s/B180s）与宽松（B30ls/B180ls）培养条件下的差异表达基因（differential expressed genes）列表。
工作表B与C：B30（对应工作表B）及B180（对应工作表C）列表中的纳入与排除基因，通过下述方法筛选得到。其中严格条件（s）指对应基础培养基条件下无差异表达，或差异表达方向与目标结果相反。
宽松条件（ls）下的差异表达基因列表，是在严格条件基因列表的基础上，补充那些表达差异程度高于或低于血液样本检测值的基因。
在M30/M180-pre与B30/B180-pre的组间比较中，若基因的M值差值大于0.8（上调基因）或小于-0.8（下调基因），则该基因将被纳入列表。
M值用于表示上调基因的对数2比值（log2-ratio）或折叠变化（fold change），下调基因的M值则为对应指标的负值。
D为该差值的绝对值。
Prob.为通过NOISeq方法计算得到的差异表达概率值。
（XLS 1261 kb）