遇见数据集

Data for "Transcription factors form a ternary complex with NIPBL/MAU2 to localize cohesin at enhancers"

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Zenodo2025-06-13 更新2026-05-26 收录
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This deposit contains all the single-molecule trajectories reported in "Transcription factors form a ternary complex with NIPBL/MAU2 to localize cohesin at enhancers". To access the tracks, open each mat file in MATLAB. This contains a MATLAB table with the following fields: summary_table.cell_protein{i} identifies the respective dataset summary_table.X{i}{j} is an Nx2 array of x and y coordinates (in microns) for track j in condition i. N is the number of localizations in that track. Descriptions of the two files: NIPBL_tracks_e12_i12.mat: Tracks for the fast SMT protocol (12 ms exposures with continuous acquisition) NIPBL_tracks_e10_i200.mat: Tracks for the intermediate SMT protocol (10 ms exposures and 200 ms intervals) Details on data acquisition and tracking parameters can be found in the associated manuscript.

本数据集收录了发表于《转录因子与NIPBL/MAU2形成三元复合物以将黏连蛋白定位至增强子(Transcription factors form a ternary complex with NIPBL/MAU2 to localize cohesin at enhancers)》一文的全部单分子轨迹。 若需获取轨迹数据,请在MATLAB中打开每个MAT文件(mat file)。每个文件内含一个MATLAB表格,包含以下字段: - summary_table.cell_protein{i} 用于标识对应数据集 - summary_table.X{i}{j} 为条件i中轨迹j的x、y坐标(单位:微米)构成的N×2数组,其中N为该轨迹中的定位点总数。 两种文件的说明如下: 1. NIPBL_tracks_e12_i12.mat:对应快速单分子追踪(SMT, single-molecule tracking)协议的轨迹数据,采用12 ms曝光时长、连续采集模式 2. NIPBL_tracks_e10_i200.mat:对应中等速率单分子追踪协议的轨迹数据,采用10 ms曝光时长、200 ms采集间隔 数据采集与追踪参数的详细说明可参见相关研究论文。

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Zenodo
创建时间:
2024-12-08
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