Additional file 7 of nanotatoR: a tool for enhanced annotation of genomic structural variants

Additional file 7: Supplementary Table S6. nanotatoR annotation of structural variants in the DLE-labeled sample NA12878 dataset. Content of the various tabs is detailed in the first tab (“LegendS6”) of the Excel book. SVs reported in the indel, inv., and trans tabs have undergone the default nanotatoR filtration (found in self molecules, passed chimeric score threshold). Columns in each sheet of the workbook are either a direct output of SVcaller or appended by nanotatoR, as indicated in column 3 of the table. In the all_PG_OV tab, the cells containing the query genes are highlighted in purple. Details about SVcaller columns are available at https://bionanogenomics.com/wp-content/uploads/2017/03/30041-SMAP-File-Format-Specification-Sheet.pdf附加文件7：补充表S6。本表格为经DLE标记的样本NA12878数据集中结构变异的nanotatoR注释结果。该Excel工作簿各工作表的内容已在首个工作表（"LegendS6"）中详细说明。插入缺失（indel）、倒位（inv.）及易位（trans）工作表中记录的结构变异（SVs）均经过了nanotatoR默认过滤流程（即匹配自分子、通过嵌合分数阈值）。该工作簿各工作表中的列项，要么为SVcaller的直接输出结果，要么由nanotatoR追加补充，具体可参见表格第3列的说明。在all_PG_OV工作表中，包含查询基因的单元格已以紫色高亮标注。关于SVcaller列项的详细说明可访问：https://bionanogenomics.com/wp-content/uploads/2017/03/30041-SMAP-File-Format-Specification-Sheet.pdf