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NCB-A50345-T_Sequencing and mass spectrum raw data_Chen et al.

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DataCite Commons2023-04-19 更新2024-08-18 收录
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https://figshare.com/articles/dataset/NCB-A50345-T_Sequencing_and_mass_spectrum_raw_data_Chen_et_al_/22066136/1
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Sequencing data: Next-generation sequencing data is from the PARPi resistance CRISPR screen describing in this paper, by analyzing the sgRNA abundance of GeCKO v2 CRISPR knockout libraries A and B at the indicated time points in the cells before and after olaparib treatment. Including <strong>library-A-0d</strong> / <strong>library-B-0d</strong> / <strong>library-A-30d</strong> / <strong>library-B-30d and a MD5 file.</strong> <br> Mass spectrum data: For mass spectrometry, on-bead trypsin digestion was performed and liquid chromatography-tandem MS (LC-MS/MS) was carried out on the Thermo Q Exactive Hybrid quadrupole orbitrap mass spectrometer as described in this paper. Including <strong>BioID-NLS-1</strong> / <strong>BioID-NLS-2 /</strong> <strong>BioID-NUMEN / NUMEN-BioID.</strong>

测序数据:本文报道的PARP抑制剂(PARPi)耐药CRISPR筛选实验所产生的下一代测序(Next-generation sequencing)数据,通过分析奥拉帕利(olaparib)处理前后细胞中GeCKO v2 CRISPR敲除文库A与B的单导RNA(sgRNA)丰度,获取指定时间点的样本数据。数据集包含<strong>library-A-0d</strong> / <strong>library-B-0d</strong> / <strong>library-A-30d</strong> / <strong>library-B-30d</strong> 以及一个MD5校验文件。<br>质谱数据:实验采用磁珠上胰蛋白酶酶解方法,并按照本文所述流程,在赛默飞Q Exactive混合型四极杆-轨道阱质谱仪上完成液相色谱-串联质谱(liquid chromatography-tandem MS, LC-MS/MS)检测。数据集包含<strong>BioID-NLS-1</strong> / <strong>BioID-NLS-2</strong> / <strong>BioID-NUMEN</strong> / <strong>NUMEN-BioID</strong>。
提供机构:
figshare
创建时间:
2023-04-19
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