Additional file 2: of Transcriptomic analyses of rice (Oryza sativa) genes and non-coding RNAs under nitrogen starvation using multiple omics technologies

Table S1. Read statistics of the four types of transcriptome data used in this study. Table S2. List of genes involved in nitrogen source uptake, assimilation and transport and their expression level in rice. Table S3. List of amino acid/peptide transporter genes and their expression level in rice. Table S4. Pipeline for identification of putative long non-coding RNAs in rice. Table S5. List of putative long non-coding RNAs identified in this study and their expression level in rice. Table S6. List of miRNAs analyzed in this study and their expression level in rice. Table S7. List of microRNA-targeted genes identified by Degradome-Seq. Table S8. Oligonucleotide sequences used in this study. (XLSX 1030Â kb)

表S1 本研究所用四类转录组数据的测序读段统计信息
表S2 水稻中参与氮源摄取、同化与转运的基因列表及其表达水平
表S3 水稻中氨基酸/肽转运蛋白基因列表及其表达水平
表S4 水稻潜在长链非编码RNA（long non-coding RNAs）的鉴定流程
表S5 本研究鉴定得到的潜在长链非编码RNA列表及其在水稻中的表达水平
表S6 本研究分析的microRNA (miRNA) 列表及其在水稻中的表达水平
表S7 经Degradome-Seq鉴定得到的microRNA靶基因列表
表S8 本研究所用的寡核苷酸序列
（XLSX格式，文件大小1030千字节）