A zinc knuckle gene on the Y chromosome (zkY) determines sex in Atlantic cod (Gadus morhua) - Supporting information

S1 File. Atlantic cod gadMor2.1 genome assembly.S2 File. The position and the flanking sequences of the nine sex-specific SNPs on LG11 that is heterozygous in all 49 males and homozygous in all 53 females of Atlantic cod.S3 File. The X-sequence and the Y- sequence, including codzkY, in the gadMor2.1 assembly. S4 File. Oxford nanopore sequences of Atlantic cod that aligned to the X- and Y- sequences in the gadMor2.1 assembly. S5 Table. The position of the eight autosomal gene copies of cod zkY in gadMor2.1 assembly. S6 File. MAFFT alignments of cod zkY and the eight autosomal copies in Atlantic cod. S7 File. MAFFT alignments of the Atlantic cod Y-sequence with other gadoids. S8 File. MAFFT alignments of the Atlantic cod X-sequence with other gadoids. S9 File. 102 samples ids, sex and ENA accession id.S10a and S10b File. The long-range miseq illumina data.

S1 文件：大西洋鳕鱼（Atlantic cod）gadMor2.1 基因组组装结果。
S2 文件：LG11连锁群上9个性别特异性单核苷酸多态性（Single Nucleotide Polymorphism，SNP）的位点及其侧翼序列，该位点在全部49尾雄性大西洋鳕鱼个体中呈杂合状态，在全部53尾雌性个体中呈纯合状态。
S3 文件：gadMor2.1 基因组组装结果中的X染色体序列与Y染色体序列，包含codzkY基因序列。
S4 文件：大西洋鳕鱼的牛津纳米孔测序（Oxford Nanopore）序列，可比对至gadMor2.1组装结果中的X与Y染色体序列。
S5 表格：gadMor2.1 基因组组装结果中cod zkY基因的8个常染色体拷贝的位点信息。
S6 文件：大西洋鳕鱼cod zkY基因及其8个常染色体拷贝的MAFFT多序列比对结果。
S7 文件：大西洋鳕鱼Y染色体序列与其他鳕形目鱼类序列的MAFFT多序列比对结果。
S8 文件：大西洋鳕鱼X染色体序列与其他鳕形目鱼类序列的MAFFT多序列比对结果。
S9 文件：102份样本的样本编号、性别信息及欧洲核苷酸档案馆（European Nucleotide Archive，ENA）登录号。
S10a与S10b 文件：长跨度Illumina MiSeq测序数据集。