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First Draft genome for Pagrus major

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DataCite Commons2025-06-01 更新2024-07-27 收录
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https://figshare.com/articles/First_Draft_genome_for_Pagrus_major/6962867/1
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资源简介:
The red sea bream (<i>Pagrus major</i>) belongs to the family of <i>Sparidea</i>, which includes 35 genera, 132 species and 10 subspecies. <i>Pagrus major</i> genome size was estimated as ~806 Mb using the <i>k-mer</i> method from 190.3 Gb of raw short read sequences, which were generated from Illumina sequencer . Furthermore, 73 Gb of long read sequences which were generated from PacBio sequencing method were assemble into 1657 contigs with the total size of 829.3 Mb with N50 &gt; 2.8 MB.

真鲷(英文俗称red sea bream,学名<i>Pagrus major</i>)隶属于鲷科(Sparidea),该科共计35属、132个物种及10个亚种。研究人员依托Illumina测序仪产出的190.3 Gb原始短读长序列,采用k-mer分析法估算出真鲷的基因组大小约为806 Mb。此外,借助PacBio测序技术生成的73 Gb长读长序列被组装为1657个重叠群(contig),总组装长度达829.3 Mb,其N50值大于2.8 MB。
提供机构:
figshare
创建时间:
2018-12-05
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