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Summary of BLASTn results for the virome sequences sharing nucleotide identities to the viruses in Genbank, showing the percent identity, and whether the reference viruses have been previously characterized in Florida.

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NIAID Data Ecosystem2026-03-07 收录
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https://figshare.com/articles/dataset/_Summary_of_BLASTn_results_for_the_virome_sequences_sharing_nucleotide_identities_to_the_viruses_in_Genbank_showing_the_percent_identity_and_whether_the_reference_viruses_have_been_previously_characterized_in_Florida_/451388
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Sequences range from 100 to 700 nt in length, representing partial viral genomes. The whitefly viromes contain a diverse range of viral sequences, including asequences similar to viruses previously described in the area, bsequences similar to viruses not previously identified in the area, cSequences that likely belong to new virus strains and virus species. *Jones, L.A. direct GenBank submission. +Based on the full DNA-B sequence, this fragment belonged to a new strain of a novel. Sida golden mosaic virus - [USA:Florida:Citra:2007:VEM] (SiGMV-[US:FL:Cit:07:VEM]). #Based on the full DNA-A sequence, this fragment belonged to a new virus, tentatively named Chenopodium leaf curl virus - [USA:Florida:Citra: 2007:VEM] (ChLCV-[US:FL:Cit:07:VEM]). ∧Based on the full DNA-A sequence, one of the fragments belonged to a strain of the recently identified Sida golden mosaic Linguanea virus, tentatively named SiGMLV—[US:FL:Hs:09:VEM]. @Based on the full DNA-B sequence, this fragment belonged to a novel DNA-B sequence, tentatively named Whitefly VEM Begomovirus - [USA:Florida:Homestead:2009:VEM] (WfVEMBv-[US:FL:Hs:09:VEM]).

本数据集包含的序列长度介于100至700核苷酸(nucleotide,简称nt)之间,均为病毒基因组的片段序列。该烟粉虱病毒组(whitefly virome)涵盖多种不同的病毒序列,具体可分为以下三类: a) 与该区域此前已报道的病毒序列同源的序列; b) 与该区域此前未发现的病毒序列同源的序列; c) 可能属于新型病毒毒株或病毒物种的序列。 * 由Jones, L.A.直接提交至GenBank数据库。 + 经完整DNA-B序列鉴定,该片段属于一种新型赛达金黄花叶病毒(Sida golden mosaic virus)的全新毒株,命名为[USA:Florida:Citra:2007:VEM](SiGMV-[US:FL:Cit:07:VEM])。 # 经完整DNA-A序列鉴定,该片段为一种新型病毒,暂定名为藜叶曲叶病毒(Chenopodium leaf curl virus),命名为[USA:Florida:Citra:2007:VEM](ChLCV-[US:FL:Cit:07:VEM])。 ∧ 经完整DNA-A序列鉴定,其中一个片段属于新近发现的赛达金黄花叶林奎纳病毒(Sida golden mosaic Linguanea virus)的一个毒株,暂定名为SiGMLV—[US:FL:Hs:09:VEM]。 @ 经完整DNA-B序列鉴定,该片段为一种新型DNA-B序列,暂定名为烟粉虱VEM双生病毒(Whitefly VEM Begomovirus),命名为[USA:Florida:Homestead:2009:VEM](WfVEMBv-[US:FL:Hs:09:VEM])。
创建时间:
2011-04-22
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