Additional file 2 of Phytochrome-mediated shade avoidance responses impact the structure and composition of the bacterial phyllosphere microbiome of Arabidopsis

Supplementary Material 2: Additional file 2. Presence/absence data for genera identified within the bacterial phyllosphere microbiome in each sample. Presence/absence data for genera identified within the bacterial phyllosphere microbiome in wild type (WT) and phyB mutant plants (phyB) either maintained in white light (W) or transferred to simulated shade (W + FR). Taxa were identified from bacterial 16 S rRNA sequences present in the phyllosphere microbiomes using mothur (v.1.48.0) [60] and the SILVA database (v.138) [51] (n = 3 for all samples). Samples were subsampled down to the size of the sample with the lowest number of sequences before tabulating.

补充材料2：附加文件2。本文件收录各样本中细菌叶围微生物组（phyllosphere microbiome）内鉴定得到的属级类群的存在/缺失数据。该数据涵盖分别维持于白光环境（W）或转移至模拟遮阴条件（W+FR）下的野生型（WT）与光敏素B（phyB）突变体植株的细菌叶围微生物组。类群的鉴定依托叶围微生物组中的细菌16S rRNA序列，通过mothur（v.1.48.0）[60]与SILVA数据库（v.138）[51]完成，所有样本的生物学重复数均为3（n=3）。在进行制表统计前，所有样本均被抽平至测序量最低样本的序列数规模。