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Additional file 1: Figure S1. of Response of turkey muscle satellite cells to thermal challenge. I. transcriptome effects in proliferating cells

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Mendeley Data2024-06-29 更新2024-06-30 收录
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Box plot of normalized gene expression values for each of the 12 RNAseq libraries. Boxes denote upper and lower quartile with medians displayed as lines within the boxes. Figure S2. Hierarchical clustering of samples based on Euclidean distance reiterated relationships shown by PCA. The heat map below is based on experiment-wide normalized gene expression across all groups. Figure S3. Volcano plot showing the relationship between the ANOVA p-values and experiment-wise Log2 fold change for gene expression in p. major satellite cell transcriptomes during proliferation. Figure S4. Distribution of differentially expressed genes for cold (33 °C versus 38 °C) and hot (43 °C versus 38 °C) comparisons of each line (RBC2 and F) during p. major satellite cell proliferation. For each temperature comparison, the number of genes with FDR pval <0.05 and |Log2FC| > 2.0 that were shared or unique to each incubation temperature are indicated. (ZIP 2820 kb)

12个RNA测序(RNAseq)文库的标准化基因表达值箱线图。箱体代表上下四分位数,箱内横线标注中位数。 图S2:基于欧氏距离的样本层级聚类结果,印证了主成分分析(PCA)所揭示的样本关联关系。下方热图以所有组别中的实验全范围标准化基因表达数据为基础绘制。 图S3:火山图,展示了增殖期P. major肌卫星细胞转录组中,基因表达的方差分析(ANOVA)P值与实验全范围Log2倍数变化(Log2FC)之间的关联。 图S4:P. major肌卫星细胞增殖期,各品系(RBC2与F)分别进行冷刺激(33℃ vs 38℃)与热刺激(43℃ vs 38℃)比较后的差异表达基因分布。针对每一组温度比较,本研究标注了各孵育温度下共享或独有的、错误发现率(FDR)P值<0.05且|Log2FC|>2.0的基因数量。 (压缩包大小:2820千字节)
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2023-06-28
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