Additional file 5 of microRNA regulation of skin pigmentation in golden-back mutant of crucian carp from a rice-fish integrated farming system

Additional file 5: Table s1. Distribution of sequenced reads from raw data to cleaned sequences. Table s2. Summary of known and predicted miRNAs in this study. Table s3. Differentially expressed miRNAs (DEMs) in different skin color of crucian carp. Table s4. The results of qRT-PCR and small RNA sequencing. Table s5. Results of target gene analysis of various miRNAs. Table s6. GO function and KEGG pathway enrichment analysis of differentially expressed miRNAs. Table s7. Information on the correspondence between differentially miRNAs, mRNAs, and proteins. Table s8. Primers for skin DEMs and reference miRNAs in crucian carp.

附加文件5：附表S1。原始数据至洁净测序序列的测序读段分布情况。附表S2。本研究中已知及预测微小RNA (microRNA) 的汇总统计。附表S3。鲫不同皮肤颜色样本间的差异表达微小RNA (Differentially Expressed miRNAs，DEMs)。附表S4。实时定量荧光聚合酶链反应 (quantitative Real-Time Polymerase Chain Reaction，qRT-PCR) 与小RNA测序的结果。附表S5。各类微小RNA的靶基因分析结果。附表S6。差异表达微小RNA的基因本体 (Gene Ontology，GO) 功能富集与京都基因与基因组百科全书 (Kyoto Encyclopedia of Genes and Genomes，KEGG) 通路富集分析结果。附表S7。差异表达微小RNA、信使RNA (messenger RNA，mRNA) 与蛋白质间对应关系的相关信息。附表S8。鲫皮肤差异表达微小RNA及内参微小RNA的引物序列信息。