five

Additional file 2 of Chromosome-level assembly and analysis of Camelina neglecta: a novel diploid model for Camelina biotechnology research

收藏
Figshare2024-02-29 更新2026-04-08 收录
下载链接:
https://springernature.figshare.com/articles/dataset/Additional_file_2_of_Chromosome-level_assembly_and_analysis_of_Camelina_neglecta_a_novel_diploid_model_for_Camelina_biotechnology_research/25115966/1
下载链接
链接失效反馈
官方服务:
资源简介:
Additional file 2: Table S1. Raw sequencing data. Table S2. Anchored chromosome length of C. neglecta. Table S3. Evaluation of C. neglecta genome based on RNA-seq of different tissues. Table S4. Evaluation of assembly completeness. Table S5. Genetic structure of C. neglecta. Table S6. Gene function annotation statistics. Table S7. Statistics of transposable element of C. neglecta. Table S8. LTR insertion time in C. neglecta genome. Table S9. Statistics of annotated non-coding RNAs. Table S10. The GO enrichment analysis of unique gene families of C. neglecta. Table S11. The key genes involved in the oil biosynthesis pathway and their TPM in C. neglecta. Table S12. Comparison with published C. neglecta assemblies. Table S13. Gene annotation quality statistics.

附加文件2:表S1 原始测序数据。表S2 C. neglecta的锚定染色体长度。表S3 基于不同组织RNA-seq的C. neglecta基因组评估。表S4 组装完整性评估。表S5 C. neglecta的遗传结构。表S6 基因功能注释统计。表S7 C. neglecta的转座因子统计。表S8 C. neglecta基因组中的长末端重复序列(Long Terminal Repeat,LTR)插入时间。表S9 注释非编码RNA统计。表S10 C. neglecta特有基因家族的基因本体(Gene Ontology,GO)富集分析。表S11 C. neglecta油脂生物合成通路相关关键基因及其每百万转录本(Transcripts Per Million,TPM)值。表S12 与已发表的C. neglecta基因组组装结果的比较。表S13 基因注释质量统计。
提供机构:
Nazarenus, Tara J.; Lu, Shaoping; Zhou, Zhi-Wei; Wang, Shuo; Cahoon, Edgar B.; Guo, Liang; Chen, Ling-Ling; Xie, Weibo; Blume, Rostislav Y.; Blume, Yaroslav B.
创建时间:
2024-01-31
二维码
社区交流群
二维码
科研交流群
商业服务