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Genome sequence of the aurodox-producing bacterium Streptomyces goldiniensis ATCC 21386

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DataCite Commons2022-04-01 更新2024-08-26 收录
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https://figshare.com/articles/dataset/Genome_sequence_of_the_aurodox-producing_bacterium_Streptomyces_goldiniensis_ATCC_21386/19487693/1
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We report the genome sequence of <i>Streptomyces goldiniensis </i>ATCC 21386, a strain which produces the anti-bacterial and anti-virulence polyketide, aurodox. The genome of <i>S. goldiniensis </i>ATCC 21386 was sequenced using a multiplatform hybrid approach, revealing a linear genome of ~10 Mbp with a G+C content of 71 %. The genome sequence revealed 36 putative biosynthetic gene clusters (BGCs), including a large region of 271 Kbp that was rich in biosynthetic capability. The genome sequence is deposited in DDBJ/EMBL/GenBank with the accession number PRJNA602141.<br>These data represent the FastQ outputs from the Oxford Nanopore sequencing that contributed to the hybrid genome assembly.

本研究报道了<i>金迪链霉菌(Streptomyces goldiniensis)</i>ATCC 21386的基因组序列,该菌株可产生兼具抗菌与抗毒力活性的聚酮类化合物奥罗多克(aurodox)。本研究采用多平台混合测序策略对该菌株的基因组进行测序,结果显示其基因组为线性结构,全长约10 Mbp,G+C含量为71%。基因组序列分析共预测得到36个推定的生物合成基因簇(biosynthetic gene clusters, BGCs),其中包含一段长达271 Kbp、具备丰富生物合成功能的区域。该基因组序列已提交至DDBJ/EMBL/GenBank数据库,登录号为PRJNA602141。 本数据集包含用于该混合基因组组装的牛津纳米孔测序(Oxford Nanopore sequencing)所得的FastQ输出文件。
提供机构:
figshare
创建时间:
2022-03-31
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