Additional file 1: Table S1. of Clusterization in head and neck squamous carcinomas based on lncRNA expression: molecular and clinical correlates

500 lncRNA genes with the most variable expression in 426 HNSCC samples from TCGA. Table S2. lncRNA-based HNSCC TCGA sample clusters. Table S3. Surrogate lncRNA genes per sample cluster. Table S4. Common lncRNAs between surrogate c5 and overexpressed in TP53 WT-infected samples from Nohata et al. (ref [20]). Table S5. Common lncRNAs between surrogate c5 and overexpressed in HPV-infected samples from Nohata et al. (ref [20]). Table S6. Common lncRNAs between surrogate c1 to c5 samples and suborgan-specific from Nohata et al. (ref [20]). Table S7. Protein-coding genes correlated with surrogate lncRNAs per sample cluster. (XLSX 125 kb)

来自癌症基因组图谱（The Cancer Genome Atlas, TCGA）的426个头颈部鳞状细胞癌（head and neck squamous cell carcinoma, HNSCC）样本中，表达变异程度最高的500个长链非编码RNA（long non-coding RNA, lncRNA）基因。
表S2：基于长链非编码RNA的头颈部鳞状细胞癌TCGA样本聚类结果
表S3：各样本聚类对应的替代长链非编码RNA基因
表S4：替代聚类c5与Nohata等人（参考文献[20]）研究中TP53野生型感染样本内高表达基因的共有长链非编码RNA
表S5：替代聚类c5与Nohata等人（参考文献[20]）研究中人乳头瘤病毒（human papillomavirus, HPV）感染样本内高表达基因的共有长链非编码RNA
表S6：替代聚类c1至c5样本与Nohata等人（参考文献[20]）研究中器官亚特异性基因的共有长链非编码RNA
表S7：各样本聚类中与替代长链非编码RNA相关的蛋白质编码基因（XLSX 文件，大小125 KB）