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Additional file 2: of Genomes reveal marked differences in the adaptive evolution between orangutan species

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Mendeley Data2024-06-27 更新2024-06-27 收录
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Table S13. List of SNPs completely fixed for different alleles in Bornean and North Sumatran orangutans. Table S14. Functional consequences of SNPs completely fixed between North Sumatran and Bornean orangutans. Table S15. Results of the GO enrichment analysis of fixed SNPs. Table S16. Detailed information on all genes containing fixed non-synonymous SNPs between North Sumatran and Bornean orangutans. Table S17. Detailed information on all candidate genes of the iHS analysis. Table S18. Selection of candidate genes of the iHS analysis in Bornean orangutans. Table S19. Selection of candidate genes of the iHS analysis in North Sumatran orangutans. Table S20. Results of GO enrichment analysis of SK/NK/EK for the iHS selection test. Table S21. Results of GO enrichment analysis of CK/WK for the iHS selection test. Table S22. Results of GO enrichment analysis of LK/NA for the iHS selection test. Table S23. Results of GO enrichment analysis of WA for the iHS selection test. Table S24. Results of GO enrichment analysis of CK/WK for the SweeD selection test. Table S25. Results of GO enrichment analysis of SK/NK/EK for the SweeD selection test. Table S26. Results of GO enrichment analysis of LK/NA for the SweeD selection test. Table S27. Results of GO enrichment analysis of WA for the SweeD selection test. (XLSX 13976 kb)

表S13:婆罗洲红毛猩猩与北苏门答腊红毛猩猩间不同等位基因完全固定的单核苷酸多态性(Single Nucleotide Polymorphism,SNPs)列表。 表S14:北苏门答腊红毛猩猩与婆罗洲红毛猩猩间完全固定的单核苷酸多态性的功能效应。 表S15:完全固定单核苷酸多态性的基因本体(Gene Ontology,GO)富集分析结果。 表S16:北苏门答腊红毛猩猩与婆罗洲红毛猩猩间所有携带固定非同义单核苷酸多态性的基因的详细信息。 表S17:整合单倍型得分(integrated Haplotype Score,iHS)分析的所有候选基因详细信息。 表S18:婆罗洲红毛猩猩群体中iHS分析筛选得到的候选基因。 表S19:北苏门答腊红毛猩猩群体中iHS分析筛选得到的候选基因。 表S20:针对iHS选择检验的SK/NK/EK分组的GO富集分析结果。 表S21:针对iHS选择检验的CK/WK分组的GO富集分析结果。 表S22:针对iHS选择检验的LK/NA分组的GO富集分析结果。 表S23:针对iHS选择检验的WA分组的GO富集分析结果。 表S24:针对SweeD选择检验的CK/WK分组的GO富集分析结果。 表S25:针对SweeD选择检验的SK/NK/EK分组的GO富集分析结果。 表S26:针对SweeD选择检验的LK/NA分组的GO富集分析结果。 表S27:针对SweeD选择检验的WA分组的GO富集分析结果。 (XLSX 13976 kb)
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2023-06-28
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