Additional file 10 of A global phylogenomic and metabolic reconstruction of the large intestine bacterial community of domesticated cattle

Additional file 10: Table S10. Overview of virulence genes detected in the 2114 MAGs using the virulence genes of interest in the six pathogenic genera (A) and in all taxa (B). From left to right: the percentage, E-value and bitscore of diamond BLAST comparisons, the VFdb identifier, the VFdb preferred gene name, the VFdb taxon, MAG name and alternative name, the metagenomics sample, the country and the study the MAG came from, the dRep cluster identified and the average abundance of the MAG in the 436 samples. The subtable to the right presents the gene prevalence based on occurrence (the times a VFdb gene gave a positive match to the dataset).

附加文件10：表S10。基于6个致病属（A组）以及所有分类群（B组）的目标毒力基因，对2114个宏基因组组装基因组（Metagenome-Assembled Genome，MAG）中检测到的毒力基因进行总览。从左至右依次为：DIAMOND BLAST比对的百分匹配率、E值与比特得分、毒力因子数据库（Virulence Factor Database，VFdb）条目标识符、VFdb推荐基因名、VFdb对应分类群、MAG名称与别名、宏基因组样本来源、MAG所属国家及来源研究、所归属的dRep聚类簇，以及该MAG在436个样本中的平均丰度。右侧子表展示了基于出现频次的基因流行率（即某一VFdb基因与本数据集产生阳性匹配的总次数）