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Additional file 8: Table S8. of Transcriptome wide analyses reveal a sustained cellular stress response in the gill tissue of Trematomus bernacchii after acclimation to multiple stressors

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Immune system process: This table provides all differentially expressed genes exceeding the confidence threshold (FDR ≤ 0.05) that are associated with the GO Term immune system process (GO:0002376) at 7d, 28d and 56d (n = 4). The table includes the gene sequence name from the reference transcriptome, the BLAST result description, the sequence length, the number of BLAST hits to that gene sequence, the minimum e-value of the BLAST hits, the mean similarity, the # of GO terms associated with that sequence, the list of those GO terms, the Enzyme Codes associated with that sequence, InterproScan results associated with that sequence, the log2 adjusted fold change in expression, the log2 counts per million (CPM) of the reads mapped to that sequence, and the p-value and FDR reflecting the confidence in the displayed differential expression of that gene. (XLSX 23 kb)

免疫系统过程(Immune system process):本表格收录了在第7天、第28天及第56天(n=4)中,与GO术语免疫系统过程(GO:0002376)相关且满足置信阈值(错误发现率FDR≤0.05)的全部差异表达基因。表格包含以下信息:参考转录组中的基因序列名称、BLAST比对结果描述、序列长度、该基因序列的BLAST比对命中数、BLAST比对的最小e值、平均相似性、该序列关联的GO术语数量、GO术语列表、该序列关联的酶编码(Enzyme Codes)、该序列的InterproScan分析结果、经校正的表达倍数变化的log₂转换值、比对至该序列的读段每百万计数(CPM)的log₂转换值,以及反映该基因差异表达置信度的p值与错误发现率(FDR)。(XLSX格式,大小23 KB)
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2016-12-15
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