Additional file 2 of Stratified microbial communities in Australia’s only anchialine cave are taxonomically novel and drive chemotrophic energy production via coupled nitrogen-sulphur cycling

Additional file 2: Supplementary Table S1. Illumina sequencing output and coverage information. Supplementary Table S2. Physiochemical measurements from Bundera Sinkhole (obtained from Elbourne et al. 2022). Supplementary Table S3. Pairwise PERMANOVA on depth-specific groups inferred from the beta-diversity visualisations of key metabolic genes and whole metagenomes from Bundera Sinkhole. Supplementary Table S4. Correlations between chemical compound concentrations and genes involved in their cycling. Supplementary Table S5. Correlations between dissolved organic carbon (DOC) concentrations and the relative abundance of nitrogen and sulphur cycling genes. Supplementary Table S6. Summary of metagenome-assembled genomes from Bundera Sinkhole. Supplementary Table S7. Pairwise PERMANOVA on depth-specific groups inferred from the beta-diversity visualisations of MAG phyla in Bundera Sinkhole. Supplementary Table S8. Genetic markers used to infer functional traits of MAGs in Bundera Sinkhole. Supplementary Table S9. Average relative abundance of MAGs that carry the genetic markers for each trait. Supplementary Table S9. Average relative abundance of MAGs that carry the genetic markers for each trait. Supplementary Table S10. Proportion of MAGs assigned to each phylum that drive each functional traitSupplementary Table S11. Annotated transporters encoded by the four most highly abundant MAGsSupplementary

附加文件2：补充表S1：Illumina测序产出与覆盖度信息；补充表S2：邦德拉沉洞（Bundera Sinkhole）的理化测定数据（数据源自Elbourne等2022年的研究）；补充表S3：基于邦德拉沉洞关键代谢基因与全宏基因组的β多样性可视化结果所推断的深度特异性分组的成对置换多元方差分析（PERMANOVA）结果；补充表S4：化合物浓度与其循环相关基因之间的相关性分析结果；补充表S5：溶解有机碳（Dissolved Organic Carbon, DOC）浓度与氮、硫循环基因相对丰度之间的相关性分析结果；补充表S6：邦德拉沉洞宏基因组组装基因组（Metagenome-Assembled Genome, MAG）汇总信息；补充表S7：基于邦德拉沉洞宏基因组组装基因组（MAG）门类的β多样性可视化结果所推断的深度特异性分组的成对置换多元方差分析（PERMANOVA）结果；补充表S8：用于推断邦德拉沉洞宏基因组组装基因组（MAG）功能性状的遗传标记信息；补充表S9：携带各性状相关遗传标记的宏基因组组装基因组（MAG）的平均相对丰度；补充表S9：携带各性状相关遗传标记的宏基因组组装基因组（MAG）的平均相对丰度；补充表S10：驱动各功能性状的、隶属于各门类的宏基因组组装基因组（MAG）占比情况；补充表S11：丰度最高的4个宏基因组组装基因组（MAG）所编码的注释转运蛋白信息