Additional file 1: of Transcriptome analysis of egg viability in rainbow trout, Oncorhynchus mykiss

Table S1. Differentially expressed transcripts among low-, medium- and high-quality eggs identified by DESeq2. Table S2. Mean and log2FC of normalized mitochondrial DET reads. Table S3. Quality analyses for RNAs treated with DNase and submitted for RNA sequencing. Table S4. Overview of RNA-seq read alignments from the libraries constructed with defective rRNA removal kit. Table S5. Additional gene transcripts used as reference. Table S6. Primers used in real-time quantitative PCR. Table S7. Gene name abbreviations. (XLSX 506 kb)

附表S1. 经DESeq2鉴定的低、中、高质量卵的差异表达转录本（differentially expressed transcripts）
附表S2. 标准化线粒体差异表达转录本读数的平均值及log₂倍数变化
附表S3. 经脱氧核糖核酸酶（DNase）处理并提交进行RNA测序的RNA的质量分析
附表S4. 采用缺陷型核糖体RNA（ribosomal RNA, rRNA）去除试剂盒构建的文库的RNA测序（RNA-seq）读数比对情况概览
附表S5. 用作参照的额外基因转录本
附表S6. 实时定量聚合酶链反应（real-time quantitative PCR）所用引物
附表S7. 基因名称缩写
（XLSX格式，506千字节）