遇见数据集

Additional file 10: of Transcriptome sequencing of Mycosphaerella fijiensis during association with Musa acuminata reveals candidate pathogenicity genes

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Table S7. Blastp results for genes in differentially expressed gene clusters in infected leaf tissue. For each gene in differentially expressed gene clusters, tables indicate its description in Figs. 7 and 9, and Additional file 13: Figures S7 and Additional file 14: Figure S8, the JGI gene and protein IDs, the log2 fold change, the adjusted p-value for differential expression, the NCBI accession number, the location of the gene on the M. fijiensis genome scaffold, GO, KOG, and Interpro descriptions from JGI, domains identified using the Conserved Domain Database, and the top 10 blastp hits. Blastp hit information includes a description of the hit, the species where the hit was found, bitscore, E-value, percent identity and similarity, and the NCBI accession. Each tab within the Excel file describes a different cluster, with tabs A-M showing clusters with higher expression in infected leaf tissue (colored in green), and tabs N-R showing clusters with higher expression in culture medium (colored in blue). (XLS 1644 kb)

表S7:侵染叶片组织中差异表达基因簇内基因的BLASTp(Blastp)比对结果。针对差异表达基因簇中的每一个基因,本表格列示了其在图7、图9以及补充材料13的图S7、补充材料14的图S8中的相关说明,同时包含JGI(Joint Genome Institute)基因与蛋白ID、log₂倍变化值、差异表达校正后p值、NCBI登录号、该基因在M. fijiensis基因组支架上的定位、来自JGI的GO(Gene Ontology)、KOG(EuKaryotic Orthologous Groups)与InterPro(InterPro)注释信息、通过保守结构域数据库(Conserved Domain Database)鉴定得到的结构域,以及前10条BLASTp比对命中结果。BLASTp比对命中信息包括命中结果的描述、命中序列所属物种、比特得分、E值、序列一致性与相似性百分比,以及NCBI登录号。该Excel文件的每个工作表对应一个不同的基因簇:工作表A至M对应在侵染叶片组织中高表达的基因簇(以绿色标注),工作表N至R对应在培养基中高表达的基因簇(以蓝色标注)。(XLS格式,文件大小1644 KB)

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2016-12-14
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