Summary of sequence and structural properties of the best four predictions and chemokine CXCL17 as reference.
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ID: Protein name; Conf: confidence level of prediction (TP, true positive; HC, high confidence; LC, low confidence); UniProt: UniProt identifier; Seq: sequence region selected; Cys: number of cysteines remaining after the pre-filtering; Thx: ProHit Threading Index; %ID: percentage of sequence identity between query and template; chemokine template: name of the best chemokine template structure; diS: number of possible disulfide bonds; CK Rank: rank of chemokine fold in the pdb95 control run (only fully covered alignments); Control: agreement of model with control structures; SP: predicted signal peptide; SecP: predicted non-classical secretion; Loc: subcellular location of the query predicted by PSORT (Ex, extracellular; Nu, nuclear), Exon: number of exons in the gene encoding the query protein; Iph: intron phase of the gene encoding the query protein; ChrLoc: chromosomal location of the gene encoding the query protein.
ID: 蛋白质名称;Conf: 预测置信度(其中TP为真阳性(True Positive)、HC为高置信度、LC为低置信度);UniProt: UniProt标识符(UniProt identifier);Seq: 选定的序列区域;Cys: 预过滤后剩余的半胱氨酸残基数量;Thx: ProHit Threading 指数(ProHit Threading Index);%ID: 查询序列与模板序列的序列同一性百分比;chemokine template: 最佳趋化因子模板结构名称;diS: 潜在二硫键数量;CK Rank: pdb95对照运行中趋化因子折叠结构的排名(仅针对完全覆盖的比对);Control: 模型与对照结构的一致性程度;SP: 预测信号肽;SecP: 预测非经典分泌;Loc: PSORT工具预测的查询蛋白亚细胞定位(Ex为细胞外(extracellular)、Nu为细胞核(nuclear));Exon: 编码查询蛋白的基因的外显子数目;Iph: 编码查询蛋白的基因的内含子相位;ChrLoc: 编码查询蛋白的基因的染色体定位
创建时间:
2015-12-02



