Benchmark of 5S, 16S and 23S rRNA Secondary Structures

Benchmark of 5S, 16S, 23S rRNA secondary structures taken from the CRW database https://crw-site.chemistry.gatech.edu/ Each molecule is available in bpseq, ct and dot-bracket-letter (db) format. For each format a version without header/additional information/comments is available in the corresponding bpseq-nH, ct-nH, db-nH folders. In the files Archaea.xlsx, Bacteria.xlsx and Eukaryota.xslx the molecules in the benchmark are listed together with their Organism Name, ID and Phylogenetic classification (up to Order) according to the European Nucleotide Archive (ENA) taxonomy https://www.ebi.ac.uk/ena/browser/home The accession number is available from the headers of the bpseq and ct formats.本基准数据集包含取自CRW数据库（https://crw-site.chemistry.gatech.edu/）的5S、16S、23S核糖体RNA（ribosomal RNA, rRNA）二级结构。所有RNA分子均提供bpseq、ct及点括号字母（dot-bracket-letter, db）三种格式文件。针对每种格式，均提供不含表头、额外信息及注释的精简版本，分别存放于对应的bpseq-nH、ct-nH、db-nH文件夹中。在Archaea.xlsx、Bacteria.xlsx及Eukaryota.xslx文件中，本基准数据集收录的所有RNA分子均附带其生物名称、编号以及依据欧洲核苷酸档案库（European Nucleotide Archive, ENA）分类体系（至目级）得到的系统发育分类信息，分类体系参考自欧洲核苷酸档案库官网（https://www.ebi.ac.uk/ena/browser/home）的分类标准。bpseq与ct格式文件的文件头中可获取对应分子的登录号。