TCGA-Reports: A Machine-Readable Pathology Report Resource for Benchmarking Text-Based AI Models. Kefeli et al.

This dataset contains 9,523 machine-readable pathology reports originally published by The Cancer Genome Atlas (TCGA) in PDF format. 32 tissues or cancer-types are represented in the final dataset, and reports were generated at a wide variety of institutions. The reports have undergone data selection, OCR-translation, TCGA-artifact removal, form removal, and site-specific section header removal. The final dataset consists of high-quality, clean text with high information content. Please see Kefeli et al. (2024) for additional details.

本数据集收录9523份可机器读取的病理报告，这些报告最初由癌症基因组图谱（The Cancer Genome Atlas, TCGA）以PDF格式发布。最终数据集涵盖32种组织或癌症类型，报告来自众多不同的医疗机构。所有报告均经过数据筛选、光学字符识别（Optical Character Recognition, OCR）转译、TCGA特有伪影去除、格式模板移除以及各来源机构专属章节标题移除处理。最终数据集包含信息含量高、质量精良的纯净文本。如需了解更多细节，请参阅Kefeli等人（2024）的相关研究。