Human intestinal Bacteria Collection (HiBC): Genome sequences

The Human intestinal Bacteria Collection (HiBC) is a collection of bacterial strains, isolated from the human gut for which 16S rRNA gene sequences, genome sequences and culture conditions are made available to the research community. In addition to previously described bacteria, we include strains that represent novel species which have been taxonomically described and validly named, or will be in the future. This collection will be updated regularly.

This dataset includes the genome sequences of the isolates in the FASTA nucleotide format. Plasmids sequences when present are located at the very end of the file.

UPDATE v3: The genome of one of our isolate had been unfortunately swapped. This mistake has been now corrected on Zenodo and Coscine. The genome of Segatella sinensis CLA-AA-H117 should be considered correct with 103 contigs and 3 671 232 nt. Please note that the genome available at the NCBI is the correct one (GCA_040324585.2). Two typos regarding taxonomy have been corrected as well: Maccoya intestinihominis has been corrected to Maccoyia intestinihominis and Faecousia faecis to Faecousia intestinalis.

人体肠道细菌集合（Human intestinal Bacteria Collection，HiBC）是一类从人体肠道分离得到的细菌菌株集合，其16S rRNA基因序列、基因组序列及培养条件均向科研社区公开。除已报道的细菌菌株外，本集合还涵盖了已完成分类学描述并获得有效命名，或即将完成上述工作的新物种菌株。该集合将定期更新。

本数据集包含以FASTA核苷酸格式存储的分离株基因组序列。若存在质粒序列，则位于文件末尾。

版本3更新：我们的一株分离株的基因组不幸被误替换。该错误现已在Zenodo和Coscine平台完成修正。菌株Segatella sinensis CLA-AA-H117的基因组为正确版本，包含103个重叠群，总长3 671 232 nt。请注意，美国国家生物技术信息中心（National Center for Biotechnology Information, NCBI）上的对应基因组（登录号GCA_040324585.2）为正确版本。此外还修正了两处分类学拼写错误：将Maccoya intestinihominis修正为Maccoyia intestinihominis，将Faecousia faecis修正为Faecousia intestinalis。