SNPs with cell-type-specific AEI in the Fadista data when the Baron single-cell data were used as reference.
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https://figshare.com/articles/dataset/SNPs_with_cell-type-specific_AEI_in_the_Fadista_data_when_the_Baron_single-cell_data_were_used_as_reference_/14166420
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We applied BSCET to the Fadista pancreatic islets bulk RNA-seq data [15] using the MuSiC [14] proportion estimates obtained from the Baron single-cell reference [12]. We detected 300 SNPs across 148 genes with significant cell-type-specific AEI (FDR adjusted p-value < 0.05).
(XLSX)
我们将BSCET应用于Fadista胰岛批量RNA测序(bulk RNA-seq)数据[15],采用了从Baron单细胞参考数据集[12]中获取的MuSiC[14]比例估计值。我们在148个基因中共检测到300个单核苷酸多态性(Single Nucleotide Polymorphisms, SNPs),这些位点存在显著的细胞类型特异性等位基因特异性表达(Allele-Specific Expression, AEI),经错误发现率(False Discovery Rate, FDR)校正后的p值小于0.05。(XLSX)
创建时间:
2021-03-04



