Additional file 2 of Alternative transcription start sites contribute to acute-stress-induced transcriptome response in human skeletal muscle

Additional file 2. Table S1. All and firstly annotated CAGE TSS clusters in the human vastus lateralis muscle. To eliminate low expressed CAGE TSS clusters 10 percent cutoff was applied to CAGE TSS clusters annotated to TSS, 5’UTR, CDS, 3’UTR, Non coding exon, or Verified by RNA sequencing and belonging to a gene. These CAGE TSS clusters were marked as Major or Minor; no cutoff was applied to CAGE TSS clusters belonging to Intron and Intergenic.

补充材料2 表S1：人类股外侧肌中全部已注释及首次注释的CAGE转录起始位点簇（Cap Analysis of Gene Expression Transcription Start Site Clusters, CAGE TSS簇）。为剔除低表达的CAGE TSS簇，对注释至转录起始位点（Transcription Start Site, TSS）、5'非翻译区（5' Untranslated Region, 5'UTR）、编码区（Coding Sequence, CDS）、3'非翻译区（3' Untranslated Region, 3'UTR）、非编码外显子，或经RNA测序验证且隶属于某基因的CAGE TSS簇应用10%截断阈值。此类CAGE TSS簇被标记为‘主要’或‘次要’；而属于内含子与基因间区的CAGE TSS簇未应用该截断阈值。