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HiC/TCC data of barley (H. vulgare) plants. HiC/TCC

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NIAID Data Ecosystem2026-03-09 收录
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We employed chromosome conformation capture sequencing (HiC) and its derivative protocol tethered chromosome conformation capture (TCC) to interrogate the three-dimensional conformation of barley chromatin in the nucleus. These data were used (i) for chromosome-scale sequence scaffolding in frame of the International Barley Genome Sequencing Consortium's effort to construct a map-based reference sequence assembly of barley cv. "Morex" and (ii) to describe the three-dimensional conformation of the barley genome at megabase resolution on the basis of this genome sequence.

本研究采用染色体构象捕获测序(HiC,chromosome conformation capture sequencing)及其衍生方案锚定染色体构象捕获(TCC,tethered chromosome conformation capture),对细胞核内大麦染色质的三维构象进行解析。所获数据可用于两项研究:(i)在国际大麦基因组测序联盟(International Barley Genome Sequencing Consortium)构建大麦栽培品种"Morex"的基于图谱的参考基因组组装工作的框架下,完成染色体尺度的序列挂载;(ii)基于该基因组序列,以兆碱基分辨率描述大麦基因组的三维构象。

创建时间:
2016-08-25
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