Data from: Phylogenomics, reticulation, and biogeographical history of Elaeagnaceae

This archive contains code and data used for the paper "Phylogenomics, reticulation, and biogeographical history of Elaeagnaceae"(Gu, Wei; Zhang, Ting; Liu, Shui-Yin; Tian, Qin1; Yang, Chen-Xuan; Lu, Qing; Fu, Xiao-Gang; Kates, Heather; Stull, Gregory; Soltis, Pamela; Soltis, Douglas; Folk, Ryan; Guralnick, Robert; Li, De-Zhu; Yi, Ting-Shuang), Plant Diversity, 2024.This work focuses on the phylogenetic relationships within Elaeagnaceae, hybridizations, origination and dispersals of the family, and presents the most comprehensive phylogenetic framework for Elaeagnaceae to date, offers new insights into previously unresolved relationships in Elaeagnus, and provides a foundation for further studies on classification, evolution, biogeography, and conservation of Elaeagnaceae.

本归档文件包含发表于《植物多样性（Plant Diversity）》2024年的论文《胡颓子科的系统发育基因组学、网状演化与生物地理历史》（作者：顾伟、张婷、刘水银、田琴、杨晨轩、卢青、付小刚、Heather Kates、Gregory Stull、Pamela Soltis、Douglas Soltis、Ryan Folk、Robert Guralnick、李德铢、伊廷双）所使用的代码与数据。本研究聚焦胡颓子科（Elaeagnaceae）的内部系统发育关系、科内杂交事件、起源与扩散历史，构建了截至目前最为全面的胡颓子科系统发育框架，为胡颓子属（Elaeagnus）此前未解决的分类亲缘关系提供了全新认知，并为胡颓子科的分类学、演化生物学、生物地理学研究以及物种保护等后续研究奠定了坚实基础。