EID2_organism_locations_raw_2022.csv
收藏DataCite Commons2023-02-09 更新2024-08-18 收录
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EID2_location_interactions_raw_2022.csv contains organism-location interactions extracted from the Enhanced Infectious Diseases Database - EID2 (https://eid2.liverpool.ac.uk/). For full description of EID2 please refer to: https://www.nature.com/articles/sdata20154. <br> All interactions im this file are supported by one genetic sequence or 4 or more publicaitons and is structured as follows: <br> 1. organism: name of the organism (species, subspecies or lower rank). 2. organismID: EID2 ID 3. organismTaxID: NCBI taxid 4. rank: the rank of the organism (e.g. species, subspecies, etc). 5. category: the taxonomic classification of the organism (e.g., bacteria, virus, etc.) 6. continent: continent name 7. country: country name 8. region: name of the principal administrative division if known (blank otherwise). 9. sequencesNo: Total number of nucleotide sequences supporting the interaction. 10. papersNo: Total number of publications supporting the interaction.
EID2_location_interactions_raw_2022.csv 包含从增强型传染病数据库(Enhanced Infectious Diseases Database,缩写EID2,https://eid2.liverpool.ac.uk/)中提取的生物体-位置互作数据。如需了解EID2的完整说明,请参阅:https://www.nature.com/articles/sdata20154。<br>本文件中的所有互作数据均得到至少一条基因序列或4篇及以上公开文献的支持,其结构如下:<br>1. 生物体(organism):生物体名称(物种、亚种或更低分类阶元)。<br>2. 生物体ID(organismID):EID2数据库分配的生物体标识。<br>3. 生物体分类学ID(organismTaxID):NCBI分类学编号(NCBI taxid)。<br>4. 分类阶元(rank):该生物体的分类等级(如物种、亚种等)。<br>5. 分类类别(category):该生物体的分类学归属(如细菌、病毒等)。<br>6. 大洲(continent):大洲名称。<br>7. 国家(country):国家名称。<br>8. 行政区(region):已知的主要行政区划名称(未知则留空)。<br>9. 序列数量(sequencesNo):支持该互作的核苷酸序列总数。<br>10. 文献数量(papersNo):支持该互作的公开文献总数。
提供机构:
figshare
创建时间:
2023-02-09



