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Pond water SIP fraction microbial communities from Walnut Creek, CA, United States - JGIPond_D_60pct_10ng_1_1.6795 metagenome

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NIAID Data Ecosystem2026-03-14 收录
下载链接:
https://www.ncbi.nlm.nih.gov/sra/SRP398809
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资源简介:
SIP metagenome fraction of pond sample from Joint Genome Institute, Walnut Creek spiked with Pseudomonas putida & Escherichia coli bacterial isolates (for each isolate 10ng of DNA labeled at 60pct with C13 were added); replicate number 1. This fraction has a SIP fraction number 19 and DNA density of 1.6795 g/uL. This is part of a larger study to identify the limit of detection of JGI SIP metagenomics pipeline.

来自联合基因组研究所(Joint Genome Institute, JGI)核桃溪(Walnut Creek)池塘样本的稳定同位素探针(Stable Isotope Probing, SIP)宏基因组分馏组分:向其中掺入恶臭假单胞菌(Pseudomonas putida)与大肠杆菌(Escherichia coli)的细菌分离株,每株分离株均添加10ng经60%标记率的碳13(C13)标记DNA;该样本为第1次重复样本。此组分的SIP分馏编号为19,DNA密度为1.6795 g/μL。本样本属于一项旨在明确JGI SIP宏基因组分析流程检测限的大型研究的组成部分。
创建时间:
2022-09-26
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