ena-DATASET-KAIST-16-12-2016-08:57:12:493-50 - samples

In this study, we sequenced three NUT midline carcinoma genomes and their transcriptomes (NMC1, NMC2 and Ty-82), and two paired normal blood samples (for NMC1 and NMC2). Whole-genome sequencing libraries were generated by PCR-free methods, and sequencing run was made in HiSeq X machines. Transcriptome (mRNA) sequencing was performed in HiSeq 2500 machines. PCR duplicates-marked, indel-realigned, and base-recalibrarted BAM files are provided in our dataset.EGA dataset EGAD00001003117

本研究对3例NUT中线癌（NUT midline carcinoma，NMC）的基因组及其转录组（样本分别命名为NMC1、NMC2与Ty-82），以及对应NMC1和NMC2的2例配对正常血液样本进行了测序。全基因组测序文库采用无PCR（PCR-free）策略构建，测序工作在HiSeq X测序平台上完成；转录组（mRNA）测序则在HiSeq 2500测序平台上开展。本数据集提供了经过PCR重复标记、插入缺失（indel）重比对以及碱基校正的BAM格式文件。该数据集的EGA编号为EGAD00001003117。