Additional file 1 of Pangenome mining of the Streptomyces genus redefines species’ biosynthetic potential

Additional file 1. Metadata tables of the genomes used. Table S1: Genomes Metadata. List of 3840 genomes used at the start of the study with information on the source, quality assigned, taxonomic information based on GTDB, checkM metrics of assembly quality, bioproject accession numbers for all genomes, assigned Mash-clusters at two levels for selected Streptomyces genomes, and the RED groups from prior study. Table S2. Average BGCs (species). Number of BGCs on average across 808 detected species. Table S3. Average BGCs (Mash-clusters). Number of BGCs on average across 42 secondary Mash-clusters.

附加文件1：所用基因组的元数据表。表S1：基因组元数据。本研究初始阶段所用的3840个基因组列表，涵盖基因组来源、所分配的质控等级、基于基因组分类数据库（Genome Taxonomy Database, GTDB）的分类学信息、组装质量的CheckM评估指标、所有基因组的BioProject登录号、针对筛选出的链霉菌属（Streptomyces）基因组所分配的两级Mash聚类群（Mash-clusters），以及既往研究中的RED分组（RED）。表S2：平均生物合成基因簇（物种水平）。808个已检测物种的平均生物合成基因簇（Biosynthetic Gene Cluster, BGC）数量。表S3：平均生物合成基因簇（Mash聚类群水平）。42个次级Mash聚类群的平均生物合成基因簇数量。