Table 5 in Hidden in the hills: phylogeny of the freshwater mussel genus Alasmidonta (Bivalvia: Unionidae) and description of a new species
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Table 5. Taxonomic hypotheses inferred by different automatic delimitation methods. New species indicated in bold. Abbreviations: ASAP: Assemble species by automatic partition; PTP: Poisson tree process; bPTP: Bayesian Poisson tree process; BFD*: Bayes factor delimitation Delimitation methodA.A. varicosa (CapeA.A.A. ravenelianaA. ravenelianaA. arculaA.A.varicosaFear drainage)uaeharriensismarginata(Little Tennessee)(French Broad)triangulataundulataASAP (COI)ASAP (mtDNA_reduced)PTP (COI)Two spe-Three speciesciesPTP (ND1)Two spe-ciesPTP (mtDNA_reduced)Three spe-ciesPTP (mtDNA + ITS1)Not in datasetbPTP (COI)Eight speciesTwo spe-Four speciesThree speciesciesbPTP (ND1)Two spe-Two speciesciesbPTP (mtDNA_reduced)Three spe-Five speciesciesbPTP (mtDNA + ITS1)Not in datasetBFD* (best-fitting model) Columns with the same colour indicate that the method inferred taxa to be the same species. Methods split taxa into more than one species if designated as two or more species.
表5. 不同自动物种界定方法推导的分类学假说。新物种以粗体标注。缩写说明:ASAP:自动分区组装物种(Assemble species by automatic partition);PTP:泊松树过程(Poisson tree process);bPTP:贝叶斯泊松树过程(Bayesian Poisson tree process);BFD*:贝叶斯因子界定法(Bayes factor delimitation)。 涉及类群依次为:A. varicosa(Cape Fear drainage)、A. raveneliana、A. raveneliana、A. arcula、A. varicosa、A. uaeharriensis、A. marginata(Little Tennessee)、A. marginata(French Broad)、A. triangulata、A. undulata。 各方法物种界定结果如下: ASAP (COI):2个物种; ASAP (mtDNA_reduced):3个物种; PTP (COI):2个物种、3个物种; PTP (ND1):2个物种; PTP (mtDNA_reduced):3个物种; PTP (mtDNA + ITS1):未纳入数据集; bPTP (COI):8个物种、2个物种、4个物种、3个物种; bPTP (ND1):2个物种、2个物种; bPTP (mtDNA_reduced):3个物种、5个物种; bPTP (mtDNA + ITS1):未纳入数据集; BFD* (best-fitting model):原文未给出完整结果。 同色列代表该方法将类群推断为同一物种。若方法将类群划分为两个及以上物种,则标注为对应数量的物种。



