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LoQI: Scalable Low-Energy Molecular Conformer Generation with Quantum Mechanical Accuracy

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DataCite Commons2026-03-10 更新2026-05-03 收录
下载链接:
https://kilthub.cmu.edu/articles/dataset/LoQI_Scalable_Low-Energy_Molecular_Conformer_Generation_with_Quantum_Mechanical_Accuracy/31441570
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资源简介:
This dataset is the supplementary data/ folder from the root of the LoQI repository (conformer generation with diffusion and flow-matching models).<br>Repository: https://github.com/isayevlab/LoQIFolder location in project:data/ (project root)Contents of data/:chembl3d_stereo/processed/: preprocessed train/val/test tensors and metadata used by the codebaseloqi.ckpt: pretrained LoQI diffusion checkpointloqi_flow.ckpt: pretrained LoQI flow-matching checkpointsha256sums.txt: SHA-256 checksums for all files in this packageProcessed split files include:train_h.pt, val_h.pt, test_h.pt (processed molecule data)split-specific feature arrays/pickles (atom types, bond types, charges, aromatic/ring flags, hybridization, bond lengths, angles, dihedrals, valency, and related metadata)test-only helper files: test_rot_bonds_h.pt, test_cremp_h.pt, test_small_h.ptIntegrity verification:<br>From repository root, run:<br>sha256sums.txtAll entries should return “OK”.Notes:Paths in sha256sums.txt are repository-relative (starting with data/).If any file is regenerated, recompute checksums before redistribution.<br>

本数据集为LoQI仓库根目录下的补充`data/`文件夹,该仓库聚焦于基于扩散模型与流匹配模型的分子构象生成任务。 仓库地址:https://github.com/isayevlab/LoQI 项目内文件夹路径:`data/`(即项目根目录下) `data/`文件夹内包含以下内容: - `chembl3d_stereo/processed/`:存放经预处理后的训练、验证、测试张量与代码库所用的元数据 - `loqi.ckpt`:预训练LoQI扩散模型检查点 - `loqi_flow.ckpt`:预训练LoQI流匹配模型检查点 - `sha256sums.txt`:本数据包内所有文件的SHA-256校验和 预处理拆分文件包含: `train_h.pt`、`val_h.pt`、`test_h.pt`(已处理的分子数据) 拆分专属的特征数组/Pickle格式序列化文件(涵盖原子类型、键类型、电荷、芳香性/环标记、杂化类型、键长、键角、二面角、价态及相关元数据) 仅用于测试的辅助文件:`test_rot_bonds_h.pt`、`test_cremp_h.pt`、`test_small_h.pt` 完整性验证: 在仓库根目录下执行`sha256sum -c sha256sums.txt`,所有条目均应返回“OK”。 注意事项: `sha256sums.txt`内的路径为仓库相对路径(以`data/`开头)。 若重新生成任一文件,请在重新分发前重新计算校验和。
提供机构:
Carnegie Mellon University
创建时间:
2026-03-10
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