遇见数据集

RAMPAGE dataset for the human K562 cell line

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NIAID Data Ecosystem2026-03-10 收录
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5''-complete cDNA sequencing on ribosome-depleted total RNA from the human K562 cell line. Provides high-quality, genome-wide single-base resolution profiling of transcription start sites and their expression levels. Overall design: This dataset represents a whole-genome, single-base resolution profiling of transcription start site (TSS) expression in the human K562 cell line. These profiles were established using RAMPAGE, a high-throughput, high-accuracy 5''-complete cDNA sequencing method implemented on the Illumina platform. The data was analyzed using custom scripts and algorithms that are all available upon request.

针对人类K562细胞系中经核糖体去除处理的总RNA开展5'端完整互补DNA(cDNA)测序。该方案可实现高质量、全基因组单碱基分辨率的转录起始位点(Transcription Start Site, TSS)及其表达水平谱分析。 整体实验设计:本数据集针对人类K562细胞系开展全基因组单碱基分辨率的转录起始位点(TSS)表达谱分析。该谱图通过RAMPAGE技术构建完成,这是一种在Illumina平台上实现的高通量、高精度5'端完整cDNA测序方法。本数据集的数据分析依托自定义脚本与算法完成,所有代码与算法均可应要求提供。

创建时间:
2017-09-17
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