Data: ddRAD-Seq SNP datasets
收藏DataCite Commons2022-07-26 更新2024-07-29 收录
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https://figshare.com/articles/dataset/Data_ddRAD-Seq_SNP_datasets/19593412
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This collections contains datasets of SNP characterization of individuals of the Northern Grasshopper Mouse (Onychomys leucogaster). All datasets come from the same ddRAD sequencing library. They differ by % missing data allowed for an individual to allow a locus to be retained in the dataset. All datasets are in genepop file format, which by default stores alleles as integers [0, 1, 2] where 0 and 2 are homozygotes. Data processing and pipeline details are in the associated manuscript.
本数据集集合收录了北食蝗鼠(Onychomys leucogaster)个体的单核苷酸多态性(Single Nucleotide Polymorphism, SNP)表征数据。所有数据集均来自同一ddRAD测序文库,各数据集的差异在于:保留某个位点时,允许单个个体存在的缺失数据占比各不相同。所有数据集均采用Genepop文件格式,该格式默认将等位基因存储为整数[0, 1, 2],其中0和2代表纯合子。数据处理流程及分析细节详见关联研究手稿。
提供机构:
figshare
创建时间:
2022-07-26



