five

Beta diversity measures for the rare biosphere sub-groups across the 4 quadrants compared to the total rare biosphere (n≤5).

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https://figshare.com/articles/dataset/_Beta_diversity_measures_for_the_rare_biosphere_sub_groups_across_the_4_quadrants_compared_to_the_total_rare_biosphere_n_8804_5_/504026
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aNUNN are the non-unique non-novel members, UN are the unique novel members, UNN are the unique non-novel members, total correspond to the total rare biosphere defined at the empirical cutoff of n≤5. bNumbers are averages ± standard deviations of shared/unshared OTUs percentages for 4 data points (1 quad, and 3 quads) and 6 data points (2 quads). The percentages were calculated by dividing the number of shared/unshared OTUs between “x” quadrants by the total number of observed OTUs in those “x” quadrants. The number of shared OTUs between 2 quadrants also includes the number of OTUs that these 2 quadrants share with either one or two more quadrants. The number of shared OTUs between 3 quadrants also includes the number of OTUs that these 3 quadrants share with the fourth quadrant. cAll similarity indices values are averages ± standard deviations of 6 pair wise comparisons. We only chose those similarity indices that use the relative abundance data (instead of the abundance or the presence-absence data) due to the difference in sample sizes of the 4 groups compared.

a aNUN代表非唯一非新颖成员,UN代表唯一新颖成员,UNN代表唯一非新颖成员;三者之和对应的总集合,即为以经验阈值n≤5界定的总稀有生物圈(total rare biosphere)。 b 数值为4组数据点(对应1个样方与3个样方的场景)以及6组数据点(对应2个样方的场景)的共享/非共享操作分类单元(Operational Taxonomic Unit,OTU)占比的平均值±标准差。该占比通过将“x”个样方间的共享/非共享OTU数量,除以这些“x”个样方中观测到的OTU总数量计算得到。两个样方间的共享OTU数量,同时包含这两个样方与另外1个或2个样方共享的OTU;三个样方间的共享OTU数量,同时包含这三个样方与第四个样方共享的OTU。 c 所有相似性指数值均为6组两两比较结果的平均值±标准差。由于本次对比的4组样本量存在差异,我们仅选用基于相对丰度数据(而非绝对丰度或有无数据)计算的相似性指数。
创建时间:
2010-08-26
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