Additional file 3 of NetAct: a computational platform to construct core transcription factor regulatory networks using gene activity

Additional file 3: Supplementary tables: Table S1. Summary of the transcription factor (TF)-target databases for both human and mouse genomes. Table S2. Summary of the publicly available gene expression data sets for benchmarking TF-target gene set databases. Table S3. Sign correction for network construction and modeling. Table S4. Predicted driver TFs from network modeling of the EMT network and experimental evidences from the literature.

附加文件3：补充表格
表S1：人类与小鼠基因组的转录因子（Transcription Factor, TF）-靶标数据库汇总。
表S2：用于基准测试转录因子-靶标基因集数据库的公开可用基因表达数据集汇总。
表S3：网络构建与建模的符号校正。
表S4：基于上皮间质转化（Epithelial-Mesenchymal Transition, EMT）网络建模得到的预测驱动转录因子，以及来自文献的实验证据。