Ribosomal protein database of Staphylococcus aureus Newman strain

This work presents the ribosomal protein database of <i>Staphylococcus aureus </i>Newman strain. Original data for the work came from the annotated proteome data of the bacterium downloaded from UniProt. Using an in-house MATLAB ribosomal protein database analysis software, the original proteome data file was parsed to extract protein name and amino acid sequence of all ribosomal proteins in the species. The database also includes calculated variables such as number of residues, molecular weight, and nucleotide sequence. Overall, the presented database could serve as a ribosomal protein mass fingerprint for use in microbial identification, or it could be used in fundamental studies seeking to uncover new insights into ribosomal protein biology.

本研究构建了金黄色葡萄球菌（Staphylococcus aureus）纽曼菌株的核糖体蛋白数据库。本研究的原始数据源自从UniProt下载的该细菌的注释蛋白质组数据。本研究采用自主开发的MATLAB核糖体蛋白数据库分析软件，对原始蛋白质组数据文件进行解析，提取出该物种所有核糖体蛋白的蛋白名称与氨基酸序列。该数据库还涵盖了残基数、分子量以及核苷酸序列等经计算得到的参数。总体而言，本研究所构建的数据库可作为核糖体蛋白质量指纹图谱，用于微生物鉴定，亦可应用于旨在揭示核糖体蛋白生物学领域新认知的基础研究。