Additional file 5: of Deep genome sequencing and variation analysis of 13 inbred mouse strains defines candidate phenotypic alleles, private variation and homozygous truncating mutations
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VEP, GMS and SIFT annotations for SNPs and indels in each of the 13 strains. Total number of SNPs and indels annotated into each functional consequence predicted by VEP. Total number of SNPs with an estimated moderate (using GMS), radical (GMS), tolerated (using SIFT) and deleterious (SIFT) effect is also provided. (XLSX 8 kb)
本数据集提供了13个菌株各自的单核苷酸多态性(Single Nucleotide Polymorphism, SNP)与插入缺失(Insertion-Deletion, indel)的变异效应预测器(Variant Effect Predictor, VEP)、GMS及SIFT注释信息。同时统计了经VEP预测的各类功能后果所注释的SNP与indel总数量。此外还提供了经GMS评估为中等效应、严重效应,经SIFT预测为耐受及有害效应的SNP总数。本数据集格式为XLSX,大小8 KB。
创建时间:
2016-12-16



