遇见数据集

The evolutionary dynamics between viral mimics and host proteins

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Zenodo2025-08-31 更新2026-05-26 收录
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This dataset contains PDB, MS, MSA, and phylogenetic tree files for coding genes from human and viral genomes. The viruses included in this study are HSV1 (HHV1), EBV (HHV4), HCMV (HHV5), KHSV (HHV8). and Vaccinia virus (VACV). These files were created and used in the analysis of "The evolutionary dynamics between viral mimics and host proteins" by Fuchs, Schor, Naim et al. PDB files of human proteins are not included here, since they were retrieved from the AlphaFold website (https://alphafold.ebi.ac.uk/). Phylogenetic files do not include EBV that did not have sufficient number of related viruses to perform the evolutionary analysis.

本数据集包含来自人类与病毒基因组的编码基因对应的蛋白质数据库(PDB)、质谱(MS)、多序列比对(MSA)以及系统发育树文件。本研究纳入的病毒包括单纯疱疹病毒1型(HSV1,HHV1)、爱泼斯坦-巴尔病毒(EBV,HHV4)、人巨细胞病毒(HCMV,HHV5)、卡波西肉瘤疱疹病毒(KHSV,HHV8)以及痘苗病毒(VACV)。 本数据集的相关文件均由Fuchs、Schor、Naim等人在《病毒模拟物与宿主蛋白间的进化动力学》(*The evolutionary dynamics between viral mimics and host proteins*)的研究中创建并用于相关分析。 此处未收录人类蛋白质的PDB文件,因其均从AlphaFold数据库网站(https://alphafold.ebi.ac.uk/)获取。 系统发育树文件未包含EBV相关数据,因该病毒缺乏足够的近缘病毒以开展进化分析。

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Zenodo
创建时间:
2025-07-15
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