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Additional file 2 of Integrating metagenomic binning with flux balance analysis to unravel syntrophies in anaerobic CO2 methanation

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Figshare2022-08-03 更新2026-04-28 收录
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https://figshare.com/articles/dataset/Additional_file_2_of_Integrating_metagenomic_binning_with_flux_balance_analysis_to_unravel_syntrophies_in_anaerobic_CO2_methanation/20423812
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Additional file 2: Dataset S1. Genes responsible for EPS biosynthesis or involved in biofilm formation according to Model Seed categories used for targeted investigation through Hidden Markov Models. List of KEGG code, reaction and name of genes searched, combined with the number of copies found in each genome. “*” refers to results retrieved by EggNOG annotation alone, “^” refer to results obtained through HMM search and no annotation refers to results retrieved by RAST.

附加文件2:数据集S1。本数据集收录依据用于通过隐马尔可夫模型(Hidden Markov Models, HMM)开展靶向研究所采用的Model Seed分类体系划分的、负责胞外多糖(Exopolysaccharide, EPS)合成或参与生物膜形成的相关基因。内容涵盖所检索的KEGG编号、反应及基因名称,并附带各基因组中检测到的基因拷贝数。其中,"*"代表仅通过EggNOG注释得到的结果,"^"代表通过隐马尔可夫模型搜索得到的结果,未标注注释的结果则为通过RAST检索所得。
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2022-08-03
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