Sample Datasets

Supplementary file for the article " Two-dimensional data binning for the analysis of genome architecture in filamentous plant pathogens and other eukaryotes". This archive includes: The “Mygtf.gtf” file containing the final transcript calls for P. infestans genome version 2.4. The original file is available at http://www.broadinstitute.org/annotation/genome/phytophthora_infestans/MultiDownloads.html. The “RXLR_FIRs.csv” file containing intergenic regions length for RXLR effector genes only. The “Tom_expression.csv” file containing gene induction values at 2 days post inoculation on tomato.

本文件为《用于丝状植物病原菌及其他真核生物基因组结构分析的二维数据分箱法》一文的补充材料。本归档包含以下内容：名为Mygtf.gtf的文件，包含致病疫霉（P. infestans）基因组版本2.4的最终转录本调用结果，该原始文件可从布罗德研究所（Broad Institute）的下载页面http://www.broadinstitute.org/annotation/genome/phytophthora_infestans/MultiDownloads.html获取；名为RXLR_FIRs.csv的文件，仅收录RXLR效应基因（RXLR effector gene）的基因间区长度数据；名为Tom_expression.csv的文件，包含番茄接种后2天的基因诱导表达值。