Additional file 9 of The autophagy interaction network of the aging model Podospora anserina

Autophagy PPI network of P. anserina. This files contains the tabular representation of Fig. 3 and provides all underlying data of the constructed PPI network of autophagy. The network consists of all interactions from the prediction approach and the yeast two-hybrid analysis. It includes the ID of the interaction, the source ID, the target ID, and the score. This file also contains further information about the corresponding reference interactions. For each predicted interaction, the reference interaction from yeast and / or human with the corresponding publication, author, and interaction type is listed. In addition, the file contains the expression data which are depicted as expression profiles in Fig. 3. UniProt accession numbers were used as identifiers for proteins of yeast and human. The identifiers for P. anserina proteins were adopted from the P. anserina genome database. Species were distinguished by their NCBI taxonomy IDs: Homo sapiens (9606), Podospora anserina (5145) and Saccharomyces cerevisiae S288c (559292). (XLS 271 kb)

栗顶盘囊菌（Podospora anserina）自噬蛋白质相互作用（Protein-Protein Interaction, PPI）网络数据集。本文件以表格形式呈现了图3的内容，并提供了所构建的自噬PPI网络的全部底层数据。该网络涵盖了预测方法与酵母双杂交分析得到的所有相互作用条目，包含相互作用ID、来源蛋白ID、靶标蛋白ID以及相互作用评分。本文件还收录了对应参考相互作用的补充信息：针对每一条预测得到的相互作用，文件列出了源自酵母和/或人类的参考相互作用，以及对应的文献、作者与相互作用类型。此外，本文件还包含了图3中以表达谱形式展示的表达数据。酵母与人类的蛋白质标识符采用通用蛋白质资源（Universal Protein Resource, UniProt）登录号；栗顶盘囊菌的蛋白质标识符则取自其基因组数据库。物种通过NCBI分类学编号进行区分：智人（Homo sapiens，9606）、栗顶盘囊菌（Podospora anserina，5145）以及酿酒酵母S288c（Saccharomyces cerevisiae S288c，559292）。（XLS 271 KB）